YPEL1

Gene symbol: YPEL1
Gene: 29799
Uniprot Function: May play a role in epithelioid conversion of fibroblasts.
Mitotic Index 0.0284
Interphase Cluster: #221 (4 genes)
Mitotic Cluster: #8 (46 genes)
sgRNA 1: ACTGCAAGACCACGCTCGGG (interphase cells: 1170, mitotic cells: 30)
sgRNA 2: AGTGGATACAGCTGTACGTT (interphase cells: 898, mitotic cells: 28)
sgRNA 3: GCAGTTCTCGCAGTAGATGT (interphase cells: 2389, mitotic cells: 82)
sgRNA 4: GTACTCACACGGAATTGAAG (interphase cells: 1431, mitotic cells: 32)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated -2.671e-02 4285 of 5322 0.659
Nucleus DNA Mean -4.959e-03 2141 of 5322 0.964
Nucleus gH2AX Mean 0.073 2755 of 5322 0.065
Nucleus DNA - gH2AX Correlation -1.385e-01 4622 of 5322 1.021e-04
Nucleus Shape Area 0.004 3162 of 5322 0.972
Nucleus Shape Eccentricity 0.030 1727 of 5322 0.468
Nucleus Shape Form Factor -4.428e-02 2401 of 5322 0.274
Nucleus Shape Solidity -6.565e-02 3348 of 5322 0.052
Cell DNA Mass Displacement 0.034 2022 of 5322 0.599
Cell Tubulin Mean 0.010 2374 of 5322 0.826
Cell Tubulin Mass Displacement 0.004 2772 of 5322 0.967
Cell Actin Mean 0.002 2945 of 5322 0.961
Cell Tubulin - Actin Correlation 0.037 1882 of 5322 0.393
Cell DNA - Tubulin Correlation 0.021 2994 of 5322 0.657
Cell Shape Area -5.325e-02 4423 of 5322 0.217
Cell Shape Eccentricity -1.552e-02 4597 of 5322 0.896
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated 0.125 2130 of 5322 0.959
Nucleus DNA Mean 0.109 1368 of 5322 1.000
Nucleus DNA Mass Displacement 0.399 80 of 5322 0.999
Nucleus DNA Mean Frac 3 -1.585e-02 3364 of 5322 1.000
Nucleus gH2AX Mean 0.006 2882 of 5322 1.000
Nucleus gH2AX Mean Frac 0 0.238 222 of 5322 1.000
Nucleus Tubulin Mean Frac 0 0.244 568 of 5322 0.999
Nucleus Tubulin Mean Edge 0.143 1332 of 5322 0.999
Nucleus Tubulin Std Edge -3.053e-01 4975 of 5322 0.646
Nucleus Shape Area 0.229 1234 of 5322 0.852
Nucleus Shape Eccentricity -6.424e-02 3100 of 5322 1.000
Nucleus Shape Form Factor -1.886e-01 4022 of 5322 0.998
Cell Tubulin Mean 0.217 842 of 5322 0.975
Cell Tubulin Mean Frac 3 -2.000e-01 4071 of 5322 0.999
Cell Actin Mean 0.007 3106 of 5322 1.000
Cell Shape Area 0.208 1296 of 5322 0.994
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