SPATC1

Gene symbol: SPATC1
Gene: 375686
Uniprot Function:
Mitotic Index 0.029
Interphase Cluster: #89 (25 genes)
Mitotic Cluster: #172 (16 genes)
sgRNA 1: AACGAGTCCTCGAAGAAGTG (interphase cells: 2183, mitotic cells: 64)
sgRNA 2: AGCACCACCCACATCGCCCA (interphase cells: 4776, mitotic cells: 154)
sgRNA 3: AGTGGGTACCACGCAAGCTG (interphase cells: 1351, mitotic cells: 33)
sgRNA 4: GCATCAGCGGGTTCACGAGT (interphase cells: 565, mitotic cells: 14)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated 0.041 1272 of 5322 0.551
Nucleus DNA Mean -1.453e-02 2460 of 5322 0.813
Nucleus gH2AX Mean 0.105 1828 of 5322 0.012
Nucleus DNA - gH2AX Correlation -1.220e-01 4427 of 5322 1.021e-04
Nucleus Shape Area -1.187e-03 3329 of 5322 0.910
Nucleus Shape Eccentricity 0.051 917 of 5322 0.179
Nucleus Shape Form Factor -6.453e-02 3345 of 5322 0.098
Nucleus Shape Solidity -4.113e-02 2293 of 5322 0.228
Cell DNA Mass Displacement 0.052 1077 of 5322 0.317
Cell Tubulin Mean 0.056 1008 of 5322 0.175
Cell Tubulin Mass Displacement 0.031 1259 of 5322 0.548
Cell Actin Mean 0.004 2869 of 5322 0.935
Cell Tubulin - Actin Correlation 0.008 3291 of 5322 0.870
Cell DNA - Tubulin Correlation 0.018 3096 of 5322 0.700
Cell Shape Area -3.531e-03 3345 of 5322 0.873
Cell Shape Eccentricity 0.025 1762 of 5322 0.731
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated 0.048 3265 of 5322 0.989
Nucleus DNA Mean -1.078e-01 4363 of 5322 1.000
Nucleus DNA Mass Displacement 0.169 1041 of 5322 0.999
Nucleus DNA Mean Frac 3 -4.568e-03 3194 of 5322 1.000
Nucleus gH2AX Mean -7.322e-03 3045 of 5322 1.000
Nucleus gH2AX Mean Frac 0 -8.443e-02 3581 of 5322 1.000
Nucleus Tubulin Mean Frac 0 0.008 3375 of 5322 0.999
Nucleus Tubulin Mean Edge 0.177 1015 of 5322 0.996
Nucleus Tubulin Std Edge 0.126 991 of 5322 0.999
Nucleus Shape Area 0.049 3349 of 5322 0.990
Nucleus Shape Eccentricity -8.774e-02 3416 of 5322 1.000
Nucleus Shape Form Factor -2.032e-01 4146 of 5322 0.988
Cell Tubulin Mean 0.235 736 of 5322 0.958
Cell Tubulin Mean Frac 3 0.106 684 of 5322 0.999
Cell Actin Mean 0.079 2159 of 5322 0.997
Cell Shape Area 0.111 2443 of 5322 0.998
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