NRIP2

Due to sgRNA sequence design constraints two or more of the sgRNAs used to target this gene have multiple genomic target sites, potentially impacting the observed phenotype through increased DNA damage.
Gene symbol: NRIP2
Gene: 83714
Uniprot Function: Down-regulates transcriptional activation by nuclear receptors such as NR1F2.
Mitotic Index 0.0226
Interphase Cluster: #89 (25 genes)
Mitotic Cluster: #173 (16 genes)
sgRNA 1: ATCAGGTCCTGCATCCGGGG (interphase cells: 1748, mitotic cells: 46)
sgRNA 2: CGTCTTTGGATCACACTGCG (interphase cells: 1355, mitotic cells: 32)
sgRNA 3: CTTAGAGTGGCCGTTGACAC (interphase cells: 947, mitotic cells: 19)
sgRNA 4: TTGCAGTTGACCAGAAGAGC (interphase cells: 1319, mitotic cells: 27)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated -2.861e-02 4360 of 5322 0.636
Nucleus DNA Mean -1.791e-02 2551 of 5322 0.759
Nucleus gH2AX Mean 0.127 1378 of 5322 0.004
Nucleus DNA - gH2AX Correlation -8.616e-02 3641 of 5322 0.004
Nucleus Shape Area 0.024 2490 of 5322 0.795
Nucleus Shape Eccentricity 0.029 1809 of 5322 0.497
Nucleus Shape Form Factor -8.459e-02 4042 of 5322 0.037
Nucleus Shape Solidity -7.747e-02 3736 of 5322 0.025
Cell DNA Mass Displacement 0.035 1909 of 5322 0.574
Cell Tubulin Mean 0.013 2263 of 5322 0.782
Cell Tubulin Mass Displacement 0.039 922 of 5322 0.439
Cell Actin Mean 0.018 2405 of 5322 0.749
Cell Tubulin - Actin Correlation 0.034 2026 of 5322 0.463
Cell DNA - Tubulin Correlation 0.032 2520 of 5322 0.445
Cell Shape Area 0.039 1863 of 5322 0.623
Cell Shape Eccentricity -4.770e-03 4033 of 5322 0.981
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated 0.126 2108 of 5322 0.961
Nucleus DNA Mean 0.031 2463 of 5322 1.000
Nucleus DNA Mass Displacement -2.519e-02 3893 of 5322 0.999
Nucleus DNA Mean Frac 3 -2.843e-02 3550 of 5322 1.000
Nucleus gH2AX Mean 0.211 688 of 5322 1.000
Nucleus gH2AX Mean Frac 0 0.005 2204 of 5322 1.000
Nucleus Tubulin Mean Frac 0 0.145 1387 of 5322 0.999
Nucleus Tubulin Mean Edge 0.009 3051 of 5322 0.999
Nucleus Tubulin Std Edge 0.121 1058 of 5322 0.999
Nucleus Shape Area -1.655e-02 4130 of 5322 0.990
Nucleus Shape Eccentricity 0.137 545 of 5322 1.000
Nucleus Shape Form Factor -3.119e-01 4848 of 5322 0.898
Cell Tubulin Mean 0.082 2310 of 5322 0.997
Cell Tubulin Mean Frac 3 0.020 1450 of 5322 0.999
Cell Actin Mean 0.184 993 of 5322 0.997
Cell Shape Area -1.090e-01 4833 of 5322 0.998
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