LCN10

Gene symbol: LCN10
Gene: 414332
Uniprot Function: May play a role in male fertility. May act as a retinoid carrier protein within the epididymis.
Mitotic Index 0.0201
Interphase Cluster: #77 (27 genes)
Mitotic Cluster: #116 (23 genes)
sgRNA 1: CGTGGTAAAGGTGAACAAAG (interphase cells: 1437, mitotic cells: 37)
sgRNA 2: GAACGCCTGTGCATACGCGG (interphase cells: 1309, mitotic cells: 24)
sgRNA 3: GGTGCAGGAGTGGTACCCCA (interphase cells: 840, mitotic cells: 14)
sgRNA 4: TGTAGTCAGTGGACAGCACG (interphase cells: 565, mitotic cells: 10)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated 0.066 706 of 5322 0.303
Nucleus DNA Mean -1.328e-02 2422 of 5322 0.847
Nucleus gH2AX Mean 0.056 3298 of 5322 0.179
Nucleus DNA - gH2AX Correlation -4.825e-02 2349 of 5322 0.132
Nucleus Shape Area 0.082 949 of 5322 0.149
Nucleus Shape Eccentricity 0.033 1613 of 5322 0.484
Nucleus Shape Form Factor -2.444e-02 1484 of 5322 0.630
Nucleus Shape Solidity 0.007 471 of 5322 0.851
Cell DNA Mass Displacement 0.030 2318 of 5322 0.691
Cell Tubulin Mean 0.010 2376 of 5322 0.840
Cell Tubulin Mass Displacement -2.034e-02 4047 of 5322 0.803
Cell Actin Mean -4.174e-02 4195 of 5322 0.481
Cell Tubulin - Actin Correlation 0.023 2512 of 5322 0.679
Cell DNA - Tubulin Correlation 0.039 2292 of 5322 0.384
Cell Shape Area 0.062 1193 of 5322 0.364
Cell Shape Eccentricity -3.772e-03 3966 of 5322 0.987
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated 0.063 3044 of 5322 0.989
Nucleus DNA Mean 0.277 288 of 5322 1.000
Nucleus DNA Mass Displacement 0.081 2190 of 5322 0.999
Nucleus DNA Mean Frac 3 -1.329e-01 4695 of 5322 1.000
Nucleus gH2AX Mean 0.182 871 of 5322 1.000
Nucleus gH2AX Mean Frac 0 0.025 1884 of 5322 1.000
Nucleus Tubulin Mean Frac 0 -7.269e-02 4430 of 5322 0.999
Nucleus Tubulin Mean Edge 0.120 1608 of 5322 0.999
Nucleus Tubulin Std Edge 0.220 382 of 5322 0.999
Nucleus Shape Area -3.049e-02 4273 of 5322 0.990
Nucleus Shape Eccentricity 0.038 1540 of 5322 1.000
Nucleus Shape Form Factor 0.097 424 of 5322 0.998
Cell Tubulin Mean 0.079 2366 of 5322 0.997
Cell Tubulin Mean Frac 3 -7.797e-02 2664 of 5322 0.999
Cell Actin Mean 0.042 2629 of 5322 0.997
Cell Shape Area 0.225 1164 of 5322 0.994
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