GOLGA6L1

Due to sgRNA sequence design constraints two or more of the sgRNAs used to target this gene have multiple genomic target sites, potentially impacting the observed phenotype through increased DNA damage.
Gene symbol: GOLGA6L1
Gene: 283767
Uniprot Function:
Mitotic Index 0.021
Interphase Cluster: #128 (21 genes)
Mitotic Cluster: #18 (40 genes)
sgRNA 1: AAGAACAGGAGAAGATGCGG (interphase cells: 2050, mitotic cells: 42)
sgRNA 2: ACATCATAGGATGGGTAGGG (interphase cells: 1778, mitotic cells: 40)
sgRNA 3: CGAGCAGGAGAAGATACGGG (interphase cells: 1224, mitotic cells: 26)
sgRNA 4: TCTGCAGCTCCTTACCCAGG (interphase cells: 1321, mitotic cells: 29)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated -1.059e-02 3649 of 5322 0.868
Nucleus DNA Mean -7.141e-02 4127 of 5322 0.078
Nucleus gH2AX Mean 0.144 1096 of 5322 8.823e-04
Nucleus DNA - gH2AX Correlation -2.443e-01 5217 of 5322 1.021e-04
Nucleus Shape Area 0.054 1557 of 5322 0.350
Nucleus Shape Eccentricity 0.115 122 of 5322 4.529e-04
Nucleus Shape Form Factor -1.806e-01 5138 of 5322 2.872e-04
Nucleus Shape Solidity -2.019e-01 5111 of 5322 1.903e-04
Cell DNA Mass Displacement 0.067 609 of 5322 0.136
Cell Tubulin Mean 0.129 336 of 5322 0.001
Cell Tubulin Mass Displacement 0.116 145 of 5322 3.984e-04
Cell Actin Mean 0.033 1967 of 5322 0.518
Cell Tubulin - Actin Correlation 0.130 375 of 5322 2.896e-04
Cell DNA - Tubulin Correlation 0.235 257 of 5322 1.948e-04
Cell Shape Area -1.399e-02 3628 of 5322 0.718
Cell Shape Eccentricity 0.042 832 of 5322 0.447
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated -2.698e-02 4244 of 5322 0.993
Nucleus DNA Mean 0.041 2295 of 5322 1.000
Nucleus DNA Mass Displacement 0.131 1490 of 5322 0.999
Nucleus DNA Mean Frac 3 0.196 645 of 5322 1.000
Nucleus gH2AX Mean -3.309e-02 3393 of 5322 1.000
Nucleus gH2AX Mean Frac 0 -2.129e-01 4867 of 5322 1.000
Nucleus Tubulin Mean Frac 0 0.010 3341 of 5322 0.999
Nucleus Tubulin Mean Edge 0.016 2957 of 5322 0.999
Nucleus Tubulin Std Edge -1.225e-01 4115 of 5322 0.999
Nucleus Shape Area 0.162 1875 of 5322 0.951
Nucleus Shape Eccentricity -2.837e-01 4918 of 5322 1.000
Nucleus Shape Form Factor -8.045e-02 2573 of 5322 0.998
Cell Tubulin Mean 0.114 1866 of 5322 0.997
Cell Tubulin Mean Frac 3 0.200 231 of 5322 0.999
Cell Actin Mean 0.111 1723 of 5322 0.997
Cell Shape Area 0.006 3827 of 5322 0.999
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