CKAP5

Gene symbol: CKAP5
Gene: 9793
Uniprot Function: Binds to the plus end of microtubules and regulates microtubule dynamics and microtubule organization. Acts as processive microtubule polymerase. Promotes cytoplasmic microtubule nucleation and elongation. Plays a major role in organizing spindle poles. In spindle formation protects kinetochore microtubules from depolymerization by KIF2C and has an essential role in centrosomal microtubule assembly independently of KIF2C activity. Contributes to centrosome integrity. Acts as component of the TACC3/ch-TOG/clathrin complex proposed to contribute to stabilization of kinetochore fibers of the mitotic spindle by acting as inter-microtubule bridge. The TACC3/ch-TOG/clathrin complex is required for the maintenance of kinetochore fiber tension (PubMed:23532825). Enhances the strength of NDC80 complex-mediated kinetochore-tip microtubule attachments (PubMed:27156448).
Mitotic Index 0.1147
Interphase Cluster: #54 (30 genes)
Mitotic Cluster: #214 (9 genes)
sgRNA 1: CTCAATGTATTCATCCCGTG (interphase cells: 140, mitotic cells: 22)
sgRNA 2: GTTACGCAAGGGACCAGCTG (interphase cells: 506, mitotic cells: 66)
sgRNA 3: TCTTAAAGTGGCTTACCCTG (interphase cells: 189, mitotic cells: 30)
sgRNA 4: TGTCACTGATTCCAATGCAG (interphase cells: 292, mitotic cells: 28)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated -8.562e-02 5199 of 5322 0.283
Nucleus DNA Mean 0.152 366 of 5322 0.016
Nucleus gH2AX Mean 0.290 304 of 5322 2.456e-04
Nucleus DNA - gH2AX Correlation -6.775e-02 3029 of 5322 0.203
Nucleus Shape Area -1.111e-01 4876 of 5322 0.088
Nucleus Shape Eccentricity 0.047 1015 of 5322 0.561
Nucleus Shape Form Factor -5.035e-02 2700 of 5322 0.496
Nucleus Shape Solidity -2.049e-01 5125 of 5322 1.903e-04
Cell DNA Mass Displacement -2.326e-02 5116 of 5322 0.832
Cell Tubulin Mean 0.304 112 of 5322 2.141e-04
Cell Tubulin Mass Displacement -2.119e-02 4089 of 5322 0.884
Cell Actin Mean 0.347 107 of 5322 1.723e-04
Cell Tubulin - Actin Correlation 0.078 804 of 5322 0.302
Cell DNA - Tubulin Correlation 0.083 1201 of 5322 0.212
Cell Shape Area -1.576e-01 4954 of 5322 0.011
Cell Shape Eccentricity 0.009 3013 of 5322 0.972
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated 0.458 176 of 5322 0.237
Nucleus DNA Mean -7.986e-02 4073 of 5322 1.000
Nucleus DNA Mass Displacement 0.364 123 of 5322 0.999
Nucleus DNA Mean Frac 3 0.234 420 of 5322 1.000
Nucleus gH2AX Mean 0.040 2385 of 5322 1.000
Nucleus gH2AX Mean Frac 0 0.370 56 of 5322 1.000
Nucleus Tubulin Mean Frac 0 0.538 67 of 5322 0.089
Nucleus Tubulin Mean Edge 0.002 3156 of 5322 1.000
Nucleus Tubulin Std Edge -6.225e-01 5251 of 5322 0.007
Nucleus Shape Area 0.966 39 of 5322 0.001
Nucleus Shape Eccentricity -5.043e-01 5214 of 5322 0.461
Nucleus Shape Form Factor -6.311e-01 5267 of 5322 0.104
Cell Tubulin Mean 1.012 8 of 5322 0.004
Cell Tubulin Mean Frac 3 -4.619e-01 5145 of 5322 0.282
Cell Actin Mean -3.523e-02 3706 of 5322 0.997
Cell Shape Area 0.484 216 of 5322 0.351
( Reset Zoom )
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity

( Reset Zoom )
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity

MIT Central Accessability