ABCF1

Gene symbol: ABCF1
Gene: 23
Uniprot Function: Isoform 2 is required for efficient Cap- and IRES-mediated mRNA translation initiation. Isoform 2 is not involved in the ribosome biogenesis.
Mitotic Index 0.0267
Interphase Cluster: #112 (22 genes)
Mitotic Cluster: #21 (38 genes)
sgRNA 1: AACTGCCACCGCGATGCCGA (interphase cells: 1192, mitotic cells: 21)
sgRNA 2: CTGCAGAGGCCAAAGCACGG (interphase cells: 1694, mitotic cells: 60)
sgRNA 3: GATGGAGTATGAGCGCCAAG (interphase cells: 1770, mitotic cells: 50)
sgRNA 4: TGTAATTGCCCCTATAGTAG (interphase cells: 1467, mitotic cells: 37)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated 0.022 2016 of 5322 0.792
Nucleus DNA Mean 0.186 316 of 5322 1.505e-04
Nucleus gH2AX Mean 0.057 3274 of 5322 0.130
Nucleus DNA - gH2AX Correlation 0.054 327 of 5322 0.098
Nucleus Shape Area -1.596e-01 4987 of 5322 1.633e-04
Nucleus Shape Eccentricity -2.006e-02 4222 of 5322 0.718
Nucleus Shape Form Factor -2.262e-02 1385 of 5322 0.618
Nucleus Shape Solidity -7.568e-02 3681 of 5322 0.023
Cell DNA Mass Displacement 0.026 2620 of 5322 0.696
Cell Tubulin Mean -1.835e-01 5149 of 5322 2.141e-04
Cell Tubulin Mass Displacement -9.986e-02 5134 of 5322 0.002
Cell Actin Mean -1.450e-02 3474 of 5322 0.844
Cell Tubulin - Actin Correlation 0.053 1344 of 5322 0.171
Cell DNA - Tubulin Correlation -2.664e-02 4630 of 5322 0.509
Cell Shape Area -1.213e-01 4866 of 5322 0.001
Cell Shape Eccentricity 0.022 1954 of 5322 0.776
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated -3.681e-03 3985 of 5322 0.996
Nucleus DNA Mean 0.037 2361 of 5322 1.000
Nucleus DNA Mass Displacement 0.142 1334 of 5322 0.999
Nucleus DNA Mean Frac 3 0.012 2948 of 5322 1.000
Nucleus gH2AX Mean -9.647e-02 4200 of 5322 1.000
Nucleus gH2AX Mean Frac 0 -2.587e-01 5063 of 5322 1.000
Nucleus Tubulin Mean Frac 0 0.049 2755 of 5322 0.999
Nucleus Tubulin Mean Edge -9.267e-02 4278 of 5322 0.999
Nucleus Tubulin Std Edge -5.263e-02 3298 of 5322 0.999
Nucleus Shape Area -1.188e-01 4897 of 5322 0.973
Nucleus Shape Eccentricity -6.867e-04 2124 of 5322 1.000
Nucleus Shape Form Factor -1.093e-01 2985 of 5322 0.998
Cell Tubulin Mean -1.057e-01 4610 of 5322 0.997
Cell Tubulin Mean Frac 3 0.105 695 of 5322 0.999
Cell Actin Mean 0.136 1436 of 5322 0.997
Cell Shape Area -5.721e-02 4484 of 5322 0.998
( Reset Zoom )
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity

( Reset Zoom )
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity
Brightness
Contrast
Opacity

MIT Central Accessability