TSC22D2

Gene symbol: TSC22D2
Gene: 9819
Uniprot Function:
Mitotic Index 0.0224
Interphase Cluster: #220 (6 genes)
Mitotic Cluster: #87 (25 genes)
sgRNA 1: ACGGCGGCCACCCTTCCCGT (interphase cells: 876, mitotic cells: 18)
sgRNA 2: AGCGGAGAGCCCTATAGACG (interphase cells: 1133, mitotic cells: 27)
sgRNA 3: CCCGGACGAGTCACGCACAG (interphase cells: 1684, mitotic cells: 42)
sgRNA 4: GCCAGGGTTACATTCGTCGG (interphase cells: 1668, mitotic cells: 36)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated -1.781e-01 5320 of 5322 5.407e-04
Nucleus DNA Mean -1.669e-01 5019 of 5322 1.505e-04
Nucleus gH2AX Mean -8.792e-02 5193 of 5322 0.014
Nucleus DNA - gH2AX Correlation -2.214e-01 5170 of 5322 1.021e-04
Nucleus Shape Area -5.197e-02 4485 of 5322 0.210
Nucleus Shape Eccentricity 0.136 77 of 5322 4.529e-04
Nucleus Shape Form Factor -1.192e-01 4689 of 5322 0.003
Nucleus Shape Solidity -1.721e-01 4999 of 5322 1.903e-04
Cell DNA Mass Displacement 0.036 1873 of 5322 0.566
Cell Tubulin Mean -1.832e-01 5146 of 5322 2.141e-04
Cell Tubulin Mass Displacement -1.503e-01 5240 of 5322 3.984e-04
Cell Actin Mean -8.713e-02 4831 of 5322 0.048
Cell Tubulin - Actin Correlation 0.079 798 of 5322 0.045
Cell DNA - Tubulin Correlation 0.085 1169 of 5322 0.021
Cell Shape Area -8.840e-02 4736 of 5322 0.023
Cell Shape Eccentricity 0.060 341 of 5322 0.261
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated 0.160 1692 of 5322 0.927
Nucleus DNA Mean 0.058 2051 of 5322 1.000
Nucleus DNA Mass Displacement 0.094 1996 of 5322 0.999
Nucleus DNA Mean Frac 3 -1.402e-01 4749 of 5322 1.000
Nucleus gH2AX Mean 0.061 2101 of 5322 1.000
Nucleus gH2AX Mean Frac 0 -8.106e-02 3530 of 5322 1.000
Nucleus Tubulin Mean Frac 0 0.186 970 of 5322 0.999
Nucleus Tubulin Mean Edge -3.349e-01 5151 of 5322 0.642
Nucleus Tubulin Std Edge -6.499e-02 3464 of 5322 0.999
Nucleus Shape Area 0.313 733 of 5322 0.645
Nucleus Shape Eccentricity 0.006 2009 of 5322 1.000
Nucleus Shape Form Factor -9.619e-02 2800 of 5322 0.998
Cell Tubulin Mean -1.416e-01 4841 of 5322 0.997
Cell Tubulin Mean Frac 3 -3.246e-01 4826 of 5322 0.918
Cell Actin Mean 0.028 2819 of 5322 0.997
Cell Shape Area 0.355 473 of 5322 0.807
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