TRAPPC2L

Gene symbol: TRAPPC2L
Gene: 51693
Uniprot Function: Plays a role in vesicular transport from endoplasmic reticulum to Golgi.
Mitotic Index 0.0245
Interphase Cluster: #58 (29 genes)
Mitotic Cluster: #116 (23 genes)
sgRNA 1: CAGCTCCCTCTGGTCGACCA (interphase cells: 990, mitotic cells: 19)
sgRNA 2: CTTCAGCTCGTTCTCCGTAG (interphase cells: 1068, mitotic cells: 22)
sgRNA 3: GGGCCTGCTCTACCCCACGG (interphase cells: 1148, mitotic cells: 37)
sgRNA 4: GGTGCACACATCTCTGGACG (interphase cells: 1776, mitotic cells: 47)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated -4.157e-03 3328 of 5322 0.941
Nucleus DNA Mean 0.037 1008 of 5322 0.382
Nucleus gH2AX Mean 0.131 1308 of 5322 0.003
Nucleus DNA - gH2AX Correlation -3.493e-02 1872 of 5322 0.245
Nucleus Shape Area -3.272e-02 4183 of 5322 0.460
Nucleus Shape Eccentricity -1.582e-04 3365 of 5322 0.974
Nucleus Shape Form Factor -5.319e-02 2845 of 5322 0.189
Nucleus Shape Solidity -6.224e-02 3222 of 5322 0.076
Cell DNA Mass Displacement 0.034 1971 of 5322 0.608
Cell Tubulin Mean -2.155e-03 2875 of 5322 0.991
Cell Tubulin Mass Displacement 0.003 2815 of 5322 0.974
Cell Actin Mean -9.272e-03 3298 of 5322 0.913
Cell Tubulin - Actin Correlation 0.003 3555 of 5322 0.961
Cell DNA - Tubulin Correlation -1.898e-02 4433 of 5322 0.680
Cell Shape Area 0.009 2924 of 5322 0.993
Cell Shape Eccentricity 0.024 1858 of 5322 0.773
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated -9.417e-03 4054 of 5322 0.996
Nucleus DNA Mean 0.098 1497 of 5322 1.000
Nucleus DNA Mass Displacement -1.917e-01 5167 of 5322 0.999
Nucleus DNA Mean Frac 3 -1.979e-01 5020 of 5322 1.000
Nucleus gH2AX Mean 0.122 1389 of 5322 1.000
Nucleus gH2AX Mean Frac 0 0.065 1361 of 5322 1.000
Nucleus Tubulin Mean Frac 0 -1.779e-01 5084 of 5322 0.999
Nucleus Tubulin Mean Edge -1.572e-01 4712 of 5322 0.999
Nucleus Tubulin Std Edge 0.204 453 of 5322 0.999
Nucleus Shape Area -1.353e-01 4962 of 5322 0.965
Nucleus Shape Eccentricity 0.068 1159 of 5322 1.000
Nucleus Shape Form Factor 0.130 284 of 5322 0.998
Cell Tubulin Mean -1.142e-02 3657 of 5322 0.998
Cell Tubulin Mean Frac 3 -8.325e-04 1698 of 5322 0.999
Cell Actin Mean 0.068 2300 of 5322 0.997
Cell Shape Area -6.944e-02 4590 of 5322 0.998
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