STAG2

Gene symbol: STAG2
Gene: 10735
Uniprot Function: Component of cohesin complex, a complex required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis.
Mitotic Index 0.0332
Interphase Cluster: #218 (7 genes)
Mitotic Cluster: #31 (33 genes)
sgRNA 1: AATACTAACCTTGAACCGAC (interphase cells: 1075, mitotic cells: 42)
sgRNA 2: ATACCTTGTGGATAGCATGT (interphase cells: 2252, mitotic cells: 61)
sgRNA 3: TGGAGATTATCCACTTACCA (interphase cells: 946, mitotic cells: 29)
sgRNA 4: TTGGAAAACGAGCCAATGAG (interphase cells: 2362, mitotic cells: 96)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated 0.085 474 of 5322 0.099
Nucleus DNA Mean 0.178 328 of 5322 1.505e-04
Nucleus gH2AX Mean 0.071 2807 of 5322 0.065
Nucleus DNA - gH2AX Correlation -5.967e-02 2768 of 5322 0.037
Nucleus Shape Area -3.080e-02 4147 of 5322 0.467
Nucleus Shape Eccentricity 0.128 94 of 5322 4.529e-04
Nucleus Shape Form Factor 0.008 472 of 5322 0.735
Nucleus Shape Solidity -2.429e-02 1506 of 5322 0.506
Cell DNA Mass Displacement 0.085 336 of 5322 0.047
Cell Tubulin Mean 0.003 2650 of 5322 0.927
Cell Tubulin Mass Displacement 0.094 210 of 5322 0.005
Cell Actin Mean -1.542e-01 5134 of 5322 7.680e-04
Cell Tubulin - Actin Correlation 0.033 2053 of 5322 0.458
Cell DNA - Tubulin Correlation -4.993e-01 5320 of 5322 1.948e-04
Cell Shape Area -1.519e-01 4941 of 5322 1.651e-04
Cell Shape Eccentricity 0.029 1473 of 5322 0.667
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated 0.021 3644 of 5322 0.996
Nucleus DNA Mean 0.135 1079 of 5322 1.000
Nucleus DNA Mass Displacement 0.167 1069 of 5322 0.999
Nucleus DNA Mean Frac 3 0.255 336 of 5322 1.000
Nucleus gH2AX Mean -1.362e-01 4537 of 5322 1.000
Nucleus gH2AX Mean Frac 0 0.006 2186 of 5322 1.000
Nucleus Tubulin Mean Frac 0 -1.377e-01 4920 of 5322 0.999
Nucleus Tubulin Mean Edge 0.020 2889 of 5322 0.999
Nucleus Tubulin Std Edge 0.132 925 of 5322 0.999
Nucleus Shape Area 0.013 3798 of 5322 1.000
Nucleus Shape Eccentricity -6.369e-03 2211 of 5322 1.000
Nucleus Shape Form Factor 0.044 861 of 5322 0.998
Cell Tubulin Mean 0.108 1949 of 5322 0.997
Cell Tubulin Mean Frac 3 0.005 1635 of 5322 0.999
Cell Actin Mean -4.113e-01 5293 of 5322 0.152
Cell Shape Area -2.625e-02 4203 of 5322 0.998
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