PCYT1A

Gene symbol: PCYT1A
Gene: 5130
Uniprot Function: Catalyzes the key rate-limiting step in the CDP-choline pathway for phosphatidylcholine biosynthesis.
Mitotic Index 0.026
Interphase Cluster: #104 (23 genes)
Mitotic Cluster: #105 (23 genes)
sgRNA 1: AAAGAGGCGCCCGGACCCAA (interphase cells: 1767, mitotic cells: 51)
sgRNA 2: AATACGTACCTCATTGTGGG (interphase cells: 2141, mitotic cells: 60)
sgRNA 3: CCATCGGCATAAACTCTCAC (interphase cells: 1227, mitotic cells: 25)
sgRNA 4: GGGATTATGATGTGTATGCG (interphase cells: 1932, mitotic cells: 53)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated -5.856e-02 4988 of 5322 0.167
Nucleus DNA Mean 0.057 748 of 5322 0.130
Nucleus gH2AX Mean 0.040 3787 of 5322 0.270
Nucleus DNA - gH2AX Correlation -3.203e-03 1009 of 5322 0.863
Nucleus Shape Area -1.174e-01 4892 of 5322 4.676e-04
Nucleus Shape Eccentricity -1.939e-01 5261 of 5322 4.529e-04
Nucleus Shape Form Factor -6.316e-03 798 of 5322 0.952
Nucleus Shape Solidity -6.750e-02 3415 of 5322 0.037
Cell DNA Mass Displacement 0.063 712 of 5322 0.152
Cell Tubulin Mean 4.511e-04 2757 of 5322 0.957
Cell Tubulin Mass Displacement 0.047 684 of 5322 0.243
Cell Actin Mean -5.287e-02 4405 of 5322 0.277
Cell Tubulin - Actin Correlation -3.614e-02 4850 of 5322 0.385
Cell DNA - Tubulin Correlation -9.699e-03 4159 of 5322 0.828
Cell Shape Area 0.008 2938 of 5322 0.991
Cell Shape Eccentricity -1.525e-02 4589 of 5322 0.894
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated -1.748e-01 5118 of 5322 0.856
Nucleus DNA Mean -2.105e-01 5020 of 5322 1.000
Nucleus DNA Mass Displacement -1.397e-01 4980 of 5322 0.999
Nucleus DNA Mean Frac 3 -1.480e-01 4796 of 5322 1.000
Nucleus gH2AX Mean -1.677e-01 4768 of 5322 1.000
Nucleus gH2AX Mean Frac 0 -1.314e-03 2299 of 5322 1.000
Nucleus Tubulin Mean Frac 0 -2.319e-02 3833 of 5322 0.999
Nucleus Tubulin Mean Edge 0.059 2391 of 5322 0.999
Nucleus Tubulin Std Edge -2.431e-02 2892 of 5322 0.999
Nucleus Shape Area -1.524e-01 5034 of 5322 0.929
Nucleus Shape Eccentricity -2.770e-01 4892 of 5322 1.000
Nucleus Shape Form Factor 0.098 418 of 5322 0.998
Cell Tubulin Mean -2.689e-02 3842 of 5322 0.997
Cell Tubulin Mean Frac 3 0.157 384 of 5322 0.999
Cell Actin Mean -1.092e-01 4508 of 5322 0.997
Cell Shape Area -1.267e-01 4928 of 5322 0.994
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