NUP43

Gene symbol: NUP43
Gene: 348995
Uniprot Function: Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation.
Mitotic Index 0.0227
Interphase Cluster: #104 (23 genes)
Mitotic Cluster: #173 (16 genes)
sgRNA 1: ACTACAGCTCACTACCACAC (interphase cells: 2970, mitotic cells: 72)
sgRNA 2: CAGTAGCTACAACATGCTGT (interphase cells: 1141, mitotic cells: 35)
sgRNA 3: GTAAATCCATTACATCACCA (interphase cells: 1379, mitotic cells: 20)
sgRNA 4: TCCGGGAAGTTTACAGACCG (interphase cells: 530, mitotic cells: 13)

Interphase Cluster

Mitotic Cluster

Overview

Each montage below shows randomly selected individual cell images for the same target gene separated by sgRNA, along with an example montage of cells expressing a non-targeting negative control sgRNA at the bottom. sgRNA labels in the montages correspond to the numbered sgRNA sequences in the gene info table above. The DNA (blue) and tubulin (green) channels are displayed by default, with gH2AX (grayscale) and actin (yellow) available using the check boxes. Channel brightness, contrast, and opacity are adjustable by clicking the arrow next to the channel name. When only one channel is selected, the display defaults to grayscale. Click the “Zoom” checkbox above the channel controls to enable image zooming (via scrolling) and panning (via click-and-drag).

The cell boxes displayed for this gene are square, 30.36 μm per side for the interphase montage and 30.36 μm per side for the mitotic montage.

Features

Interphase Score Rank FDR q-value
Nucleus DNA Integrated -7.894e-02 5169 of 5322 0.067
Nucleus DNA Mean 0.050 835 of 5322 0.235
Nucleus gH2AX Mean -4.106e-03 4662 of 5322 0.900
Nucleus DNA - gH2AX Correlation -2.861e-02 1665 of 5322 0.345
Nucleus Shape Area -1.805e-01 5020 of 5322 1.633e-04
Nucleus Shape Eccentricity -2.127e-01 5270 of 5322 4.529e-04
Nucleus Shape Form Factor 0.005 539 of 5322 0.823
Nucleus Shape Solidity -3.348e-02 1916 of 5322 0.362
Cell DNA Mass Displacement 0.027 2506 of 5322 0.694
Cell Tubulin Mean -5.038e-02 4324 of 5322 0.313
Cell Tubulin Mass Displacement -7.326e-02 5012 of 5322 0.057
Cell Actin Mean 0.005 2828 of 5322 0.926
Cell Tubulin - Actin Correlation -2.268e-02 4572 of 5322 0.675
Cell DNA - Tubulin Correlation -1.617e-01 5273 of 5322 1.948e-04
Cell Shape Area -1.113e-01 4831 of 5322 0.004
Cell Shape Eccentricity -7.664e-03 4210 of 5322 0.970
Mitotic Score Rank FDR q-value
Nucleus DNA Integrated 0.026 3582 of 5322 0.996
Nucleus DNA Mean -1.174e-01 4462 of 5322 1.000
Nucleus DNA Mass Displacement 0.210 673 of 5322 0.999
Nucleus DNA Mean Frac 3 -6.128e-02 3984 of 5322 1.000
Nucleus gH2AX Mean 0.141 1218 of 5322 1.000
Nucleus gH2AX Mean Frac 0 0.070 1282 of 5322 1.000
Nucleus Tubulin Mean Frac 0 0.007 3394 of 5322 0.999
Nucleus Tubulin Mean Edge -4.611e-02 3769 of 5322 0.999
Nucleus Tubulin Std Edge -7.065e-02 3540 of 5322 0.999
Nucleus Shape Area 0.119 2401 of 5322 0.989
Nucleus Shape Eccentricity 0.112 749 of 5322 1.000
Nucleus Shape Form Factor -1.272e-02 1573 of 5322 0.998
Cell Tubulin Mean -1.153e-01 4677 of 5322 0.997
Cell Tubulin Mean Frac 3 -2.389e-01 4357 of 5322 0.999
Cell Actin Mean -1.611e-01 4868 of 5322 0.997
Cell Shape Area -6.554e-02 4558 of 5322 0.998
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